org.jscience.biology.alignment
Class InvalidScoringMatrixException

java.lang.Object
  java.lang.Throwable
      java.lang.Exception
          org.jscience.biology.alignment.InvalidScoringMatrixException

All Implemented Interfaces:

java.io.Serializable

public class InvalidScoringMatrixException
extends java.lang.Exception

Signals that the substitution matrix does not comply with the specification (see for details).

See Also:

ScoringMatrix, Serialized Form

Constructor Summary

InvalidScoringMatrixException()
Constructs an InvalidScoringMatrixException with null as its error detail message.

InvalidScoringMatrixException(java.lang.String message)
Constructs an InvalidScoringMatrixException with the specified detail message.

InvalidScoringMatrixException(java.lang.String message, java.lang.Throwable cause)
Constructs an InvalidScoringMatrixException with the specified detail message and cause.

InvalidScoringMatrixException(java.lang.Throwable cause)
Constructs an InvalidScoringMatrixException with the specified cause (and a detail message that typically contains the class and detail message of cause).

Method Summary

Methods inherited from class java.lang.Throwable

fillInStackTrace, getCause, getLocalizedMessage, getMessage, getStackTrace, initCause, printStackTrace, printStackTrace, printStackTrace, setStackTrace, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

InvalidScoringMatrixException

public InvalidScoringMatrixException()

Constructs an InvalidScoringMatrixException with null as its error detail message.

InvalidScoringMatrixException

public InvalidScoringMatrixException(java.lang.String message)

Constructs an InvalidScoringMatrixException with the specified detail message.

Parameters:

message - an error message

InvalidScoringMatrixException

public InvalidScoringMatrixException(java.lang.Throwable cause)

Constructs an InvalidScoringMatrixException with the specified cause (and a detail message that typically contains the class and detail message of cause).

Parameters:

cause - a cause

InvalidScoringMatrixException

public InvalidScoringMatrixException(java.lang.String message,
                                     java.lang.Throwable cause)

Constructs an InvalidScoringMatrixException with the specified detail message and cause.

Parameters:

message - an error message

cause - a cause